In the present paper we explain the basic ideas of Robust Perron Cluster Analysis (PCCA+) and exemplify the different application areas of this new and powerful method. Recently, ...
A protein-protein interface (PPI) is defined by a pair of regions of two interacting protein molecules that are linked by non-covalent bonds. Recognition of conserved 3D patterns ...
Alexandra Shulman-Peleg, Maxim Shatsky, Ruth Nussi...
Abstract. We describe an approach to clustering the yeast protein-protein interaction network in order to identify functional modules, groups of proteins forming multi-protein comp...
During the last few years new functionalities of RNA have been discovered, renewing the need for computational tools for their analysis. To this respect, multiple sequence alignmen...
Abstract. Most software tools in homology recognition on proteins answer only a few specific questions, often leaving not much room for the interpretation of the results. We devel...
We propose two transformations on term rewrite systems (TRSs) based on reducing right hand sides: one related to the transformation order and a variant of dummy elimination. Under ...
Abstract. Service oriented architectures facilitate loosely coupled collaborations, which are established in a decentralized way. One challenge for such collaborations is to guaran...
I present a formalism that combines two methodologies: objective Bayesianism and Bayesian nets. According to objective Bayesianism, an agent’s degrees of belief (i) ought to sat...