— SPICE aims to understand the vital process of translocation of biomolecules across protein pores by computing the free energy profile of the translocating biomolecule along th...
: The Open Grid Services Architecture (OGSA) has been a major step forward for Grid Computing, but its de facto reliance on the Web Services Resource Framework (WSRF) and WSNotific...
Marty A. Humphrey, Glenn S. Wasson, Yuliyan Kiryak...
Parallel applications running on high-end computer systems manifest a complexity of performance phenomena. Tools to observe parallel performance attempt to capture these phenomena...
For decades, the high-performance computing (HPC) community has focused on performance, where performance is defined as speed. To achieve better performance per compute node, mic...
The proliferation of biological sequence data has motivated the need for an extremely fast probabilistic sequence search. One method for performing this search involves evaluating...
We present the development and use of a novel distributed geohazard modeling environment for the analysis and interpretation of large scale earthquake data sets. Our work demonstr...
In developing High-Performance Computing (HPC) software, time to solution is an important metric. This metric is comprised of two main components: the human effort required develo...
We describe the software architecture, technical features, and performance of TICK (Transparent Incremental Checkpointer at Kernel level), a system-level checkpointer implemented ...