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    BIOCOMP
    2006
    119views Bioinformatics» more  BIOCOMP 2006»
    Improving the Efficiency of Sorting by Reversals
    14 years 28 days ago
    Improving the Efficiency of Sorting by Reversals
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    Sorting signed permutations by reversals is a fundamental problem in computationial molecular biology. In this paper we present an improved algorithm for sorting by reversals. Our...
    Yijie Han
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    BIOCOMP
    2006
    118views Bioinformatics» more  BIOCOMP 2006»
    Basic Reproductive Rate of a Spatial Epidemic Seir Model using Computer Algebra Software
    14 years 28 days ago
    Basic Reproductive Rate of a Spatial Epidemic Seir Model using Computer Algebra Software
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    The use of computer algebra software has many applications in diverse fields like epidemiology. This work pretends to show how computer algebra software applications for symbolic ...
    Sebastian Guzmán, Juan Fernando Ospina
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    BIOCOMP
    2006
    118views Bioinformatics» more  BIOCOMP 2006»
    Analytical Solution of a Spatial Sir Epidemic Model with Memory Inside a Circular Habitat with Endemic Memory using CAS
    14 years 28 days ago
    Analytical Solution of a Spatial Sir Epidemic Model with Memory Inside a Circular Habitat with Endemic Memory using CAS
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    Nicolás Guarín, Juan Ospina
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    BIOCOMP
    2006
    136views Bioinformatics» more  BIOCOMP 2006»
    WebDock: A Structure-Based Drug Discovery Web Service
    14 years 28 days ago
    WebDock: A Structure-Based Drug Discovery Web Service
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    High-Throughput Docking has emerged as a well establish method for identifying lead components in the process of searching for new drugs. The High-Throughput Docking Service provi...
    Joseph Gill, Legand L. Burge III, Zengjian Hu, Wil...
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    BIOCOMP
    2006
    87views Bioinformatics» more  BIOCOMP 2006»
    Combined QM/MM Studies of Binding Effect of Cytochrome P450cam to Putidaredoxin
    14 years 28 days ago
    Combined QM/MM Studies of Binding Effect of Cytochrome P450cam to Putidaredoxin
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    Abstract - Combined QM/MM calculations of an activesite of Cytochrome P450cam have been performed, before and after a binding process of Cytochrome P450cam to Putidaredoxin. The ca...
    Marek Freindorf, Yihan Shao, Jing Kong, Thomas R. ...
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    BIOCOMP
    2006
    77views Bioinformatics» more  BIOCOMP 2006»
    Identification of Intrinsically Unstructured Regions in Proteins Using Primary Structure
    14 years 28 days ago
    Identification of Intrinsically Unstructured Regions in Proteins Using Primary Structure
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    Most proteins function only when folded into a particular 3D configuration. Recently, a class of proteins has been discovered that do not fold into any particular configuration; t...
    Mary Qu Yang, Jack Y. Yang
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    BIOCOMP
    2006
    82views Bioinformatics» more  BIOCOMP 2006»
    New Algorithms for Application of Evolution Rules based on Applicability Benchmarks
    14 years 28 days ago
    New Algorithms for Application of Evolution Rules based on Applicability Benchmarks
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    Luis Fernández, Fernando Arroyo, Juan Caste...
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    BIOCOMP
    2006
    132views Bioinformatics» more  BIOCOMP 2006»
    Filtering Tandem Repeats in DNA Sequences
    14 years 28 days ago
    Filtering Tandem Repeats in DNA Sequences
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    A tandem repeat is a sequence of two or more contiguous, approximate copies of a pattern. Tandem repeats occur in the genomes of both eukaryotic and prokaryotic organisms. They ar...
    Dina Sokol, Justin Tojeira
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    BIOCOMP
    2006
    133views Bioinformatics» more  BIOCOMP 2006»
    Acceleration of Covariance Models for Non-coding RNA Search
    14 years 28 days ago
    Acceleration of Covariance Models for Non-coding RNA Search
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    Stochastic context-free grammar (SCFG) based models for non-coding RNA (ncRNA) gene searches are much more powerful than regular grammar based models due to the ability to model in...
    Scott F. Smith 0002
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    BIOCOMP
    2006
    137views Bioinformatics» more  BIOCOMP 2006»
    Theoretical Bounds for the Number of Inferable Edges in Sparse Random Networks
    14 years 28 days ago
    Theoretical Bounds for the Number of Inferable Edges in Sparse Random Networks
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    Abstract-- The inference of a network structure from experimental data providing dynamical information about the underlying system of investigation is an important and still outsta...
    Frank Emmert-Streib, Matthias Dehmer
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