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    BIOCOMP
    2008
    143views Bioinformatics» more  BIOCOMP 2008»
    Improved Segmentation Based on Probabilistic Labeling
    14 years 8 days ago
    Improved Segmentation Based on Probabilistic Labeling
    Download  softcomp.ee.ntou.edu.tw
    ⎯This paper presents an improved multi-object segmentation algorithm based on probabilistic labeling. First, a critical look is focused on utilizing vector calculus operator and ...
    Kai-Chieh Yang, Ming-Chi Jhuang, Chun-Shun Tseng, ...
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    BIOCOMP
    2008
    135views Bioinformatics» more  BIOCOMP 2008»
    Prediction of Protein Function Using Graph Container and Message Passing
    14 years 18 days ago
    Prediction of Protein Function Using Graph Container and Message Passing
    Download  www.cs.siu.edu
    We introduce a novel parameter called container flux, which is used to measure the information sharing capacity between two distinct nodes in a graph. Other useful information, bot...
    Hongbo Zhou, Qiang Shawn Cheng, Mehdi Zargham
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    BIOCOMP
    2008
    111views Bioinformatics» more  BIOCOMP 2008»
    Stochastic Simulation Algorithms for Chemical Reactions
    14 years 18 days ago
    Stochastic Simulation Algorithms for Chemical Reactions
    Download  jigcell.cs.vt.edu
    Tae-Hyuk Ahn, Yang Cao, Layne T. Watson
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    BIOCOMP
    2008
    128views Bioinformatics» more  BIOCOMP 2008»
    Inverse protein folding in 3D hexagonal prism lattice under HP model
    14 years 18 days ago
    Inverse protein folding in 3D hexagonal prism lattice under HP model
    Download  www.pims.math.ca
    Alireza Hadj Khodabakhshi, Ján Manuch, Aras...
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    BIOCOMP
    2008
    124views Bioinformatics» more  BIOCOMP 2008»
    Analysis of Microarray Titration Experiments
    14 years 18 days ago
    Analysis of Microarray Titration Experiments
    Download  gauss.dbb.georgetown.edu
    In this paper we introduce a novel approach for the analysis of microarray titration experiments. The test introduced here can be used more generally for drug-dosage effect or time...
    Ionut Bebu, Françoise Seillier-Moiseiwitsch...
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    BIOCOMP
    2008
    140views Bioinformatics» more  BIOCOMP 2008»
    Analysis of Protein-Ligand Interactions Using Localized Stereochemical Features
    14 years 18 days ago
    Analysis of Protein-Ligand Interactions Using Localized Stereochemical Features
    Download  faculty.cs.tamu.edu
    Computational analyses of protein structure-function relationships have traditionally been based on sequence homology, fold family analysis and 3D motifs/templates. Previous struct...
    Reetal Pai, James C. Sacchettini, Thomas R. Ioerge...
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    BIOCOMP
    2008
    93views Bioinformatics» more  BIOCOMP 2008»
    Discoveries in shRNA Design
    14 years 18 days ago
    Discoveries in shRNA Design
    Download  ww2.sjc.edu
    -- To successfully apply RNAi, the very first step is to design functional siRNA or shRNA sequences targeting specific genes. Many characteristics of functional synthetic siRNAs ha...
    Hong Zhou, Xiao Zeng, Joseph Manthey
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    BIOCOMP
    2008
    146views Bioinformatics» more  BIOCOMP 2008»
    Reverse Engineering Module Networks by PSO-RNN Hybrid Modeling
    14 years 18 days ago
    Reverse Engineering Module Networks by PSO-RNN Hybrid Modeling
    Download  www.biomedcentral.com
    Background: Inferring a gene regulatory network (GRN) from high throughput biological data is often an under-determined problem and is a challenging task due to the following reas...
    Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
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    BIOCOMP
    2008
    101views Bioinformatics» more  BIOCOMP 2008»
    Combinations of Context-Free Shifts and Shifts of Finite Type
    14 years 18 days ago
    Combinations of Context-Free Shifts and Shifts of Finite Type
    Download  ita.ucsd.edu
    A Dyck shift and a Motzkin shift are mathematical models for constraints on genetic sequences. In terms of the theory of symbolic dynamics, neither of the Dyck shift nor the Motzki...
    Hiroshi Kamabe
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    BIOCOMP
    2008
    128views Bioinformatics» more  BIOCOMP 2008»
    Identifying Protein Flexibility by NMA
    14 years 18 days ago
    Identifying Protein Flexibility by NMA
    Download  complex.zesoi.fer.hr
    - Here proposed apriori method for identification of protein flexibility relies on one end-state conformation of the protein. This method has comparative advantage over many others...
    Kresimir Sikic, Branko Jeren, Sanja Tomic
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