Sciweavers

BIOCOMP
2008
14 years 20 days ago
Improved Segmentation Based on Probabilistic Labeling
⎯This paper presents an improved multi-object segmentation algorithm based on probabilistic labeling. First, a critical look is focused on utilizing vector calculus operator and ...
Kai-Chieh Yang, Ming-Chi Jhuang, Chun-Shun Tseng, ...
BIOCOMP
2008
14 years 1 months ago
Prediction of Protein Function Using Graph Container and Message Passing
We introduce a novel parameter called container flux, which is used to measure the information sharing capacity between two distinct nodes in a graph. Other useful information, bot...
Hongbo Zhou, Qiang Shawn Cheng, Mehdi Zargham
BIOCOMP
2008
14 years 1 months ago
Stochastic Simulation Algorithms for Chemical Reactions
Tae-Hyuk Ahn, Yang Cao, Layne T. Watson
BIOCOMP
2008
14 years 1 months ago
Inverse protein folding in 3D hexagonal prism lattice under HP model
Alireza Hadj Khodabakhshi, Ján Manuch, Aras...
BIOCOMP
2008
14 years 1 months ago
Analysis of Microarray Titration Experiments
In this paper we introduce a novel approach for the analysis of microarray titration experiments. The test introduced here can be used more generally for drug-dosage effect or time...
Ionut Bebu, Françoise Seillier-Moiseiwitsch...
BIOCOMP
2008
14 years 1 months ago
Analysis of Protein-Ligand Interactions Using Localized Stereochemical Features
Computational analyses of protein structure-function relationships have traditionally been based on sequence homology, fold family analysis and 3D motifs/templates. Previous struct...
Reetal Pai, James C. Sacchettini, Thomas R. Ioerge...
BIOCOMP
2008
14 years 1 months ago
Discoveries in shRNA Design
-- To successfully apply RNAi, the very first step is to design functional siRNA or shRNA sequences targeting specific genes. Many characteristics of functional synthetic siRNAs ha...
Hong Zhou, Xiao Zeng, Joseph Manthey
BIOCOMP
2008
14 years 1 months ago
Reverse Engineering Module Networks by PSO-RNN Hybrid Modeling
Background: Inferring a gene regulatory network (GRN) from high throughput biological data is often an under-determined problem and is a challenging task due to the following reas...
Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
BIOCOMP
2008
14 years 1 months ago
Combinations of Context-Free Shifts and Shifts of Finite Type
A Dyck shift and a Motzkin shift are mathematical models for constraints on genetic sequences. In terms of the theory of symbolic dynamics, neither of the Dyck shift nor the Motzki...
Hiroshi Kamabe
BIOCOMP
2008
14 years 1 months ago
Identifying Protein Flexibility by NMA
- Here proposed apriori method for identification of protein flexibility relies on one end-state conformation of the protein. This method has comparative advantage over many others...
Kresimir Sikic, Branko Jeren, Sanja Tomic