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    BIOINFORMATICS
    2006
    92views more  BIOINFORMATICS 2006»
    What should be expected from feature selection in small-sample settings
    13 years 11 months ago
    What should be expected from feature selection in small-sample settings
    Download  gsp.tamu.edu
    Motivation: High-throughput technologies for rapid measurement of vast numbers of biological variables offer the potential for highly discriminatory diagnosis and prognosis; howev...
    Chao Sima, Edward R. Dougherty
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    BIOINFORMATICS
    2006
    87views more  BIOINFORMATICS 2006»
    COPASI - a COmplex PAthway SImulator
    13 years 11 months ago
    COPASI - a COmplex PAthway SImulator
    Download  www.informs-sim.org
    Simulation and modeling is becoming one of the standard approaches to understand complex biochemical processes. Therefore, there is a big need for software tools that allow access...
    Stefan Hoops, Sven Sahle, Ralph Gauges, Christine ...
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    BIOINFORMATICS
    2006
    63views more  BIOINFORMATICS 2006»
    Remote homology detection based on oligomer distances
    13 years 11 months ago
    Remote homology detection based on oligomer distances
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    Thomas Lingner, Peter Meinicke
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    BIOINFORMATICS
    2006
    117views more  BIOINFORMATICS 2006»
    ADAM: another database of abbreviations in MEDLINE
    13 years 11 months ago
    ADAM: another database of abbreviations in MEDLINE
    Download  arrowsmith.psych.uic.edu
    Wei Zhou, Vetle I. Torvik, Neil R. Smalheiser
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    BIOINFORMATICS
    2006
    74views more  BIOINFORMATICS 2006»
    TimeTree: a public knowledge-base of divergence times among organisms
    13 years 11 months ago
    TimeTree: a public knowledge-base of divergence times among organisms
    Download  kumarlab.net
    S. Blair Hedges, Joel Dudley, Sudhir Kumar
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    BIOINFORMATICS
    2006
    97views more  BIOINFORMATICS 2006»
    Inferring gene regulatory networks from time series data using the minimum description length principle
    13 years 11 months ago
    Inferring gene regulatory networks from time series data using the minimum description length principle
    Download  gsp.tamu.edu
    Wentao Zhao, Erchin Serpedin, Edward R. Dougherty
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    BIOINFORMATICS
    2006
    75views more  BIOINFORMATICS 2006»
    PseudoPipe: an automated pseudogene identification pipeline
    13 years 11 months ago
    PseudoPipe: an automated pseudogene identification pipeline
    Download  papers.gersteinlab.org
    Zhaolei Zhang, Nicholas Carriero, Deyou Zheng, Joh...
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    BIOINFORMATICS
    2006
    53views more  BIOINFORMATICS 2006»
    Predicting interactions in protein networks by completing defective cliques
    13 years 11 months ago
    Predicting interactions in protein networks by completing defective cliques
    Download  papers.gersteinlab.org
    Haiyuan Yu, Alberto Paccanaro, Valery Trifonov, Ma...
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    BIOINFORMATICS
    2006
    135views more  BIOINFORMATICS 2006»
    Effective similarity measures for expression profiles
    13 years 11 months ago
    Effective similarity measures for expression profiles
    Download  biozon.org
    It is commonly accepted that genes with similar expression profiles are functionally related. However, there are many ways one can measure the similarity of expression profiles, a...
    Golan Yona, William Dirks, Shafquat Rahman, David ...
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    BIOINFORMATICS
    2006
    124views more  BIOINFORMATICS 2006»
    Helix Interaction Tool (HIT): a web-based tool for analysis of helix-helix interactions in proteins
    13 years 11 months ago
    Helix Interaction Tool (HIT): a web-based tool for analysis of helix-helix interactions in proteins
    Download  papers.gersteinlab.org
    Motivation: In many proteins, helix-helix interactions can be critical to establishing protein conformation (folding) and dynamics, as well as determining associations between pro...
    Anne E. Counterman Burba, Ursula Lehnert, Eric Z. ...
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