RECOMB
2004
Springer
15 years 23 days ago
2004
Springer
Abstract. We present an approach to inferring probabilistic models of generegulatory networks that is intended to provide a more mechanistic representation of transcriptional regul...
RECOMB
2004
Springer
15 years 23 days ago
2004
Springer
We present a novel classification-based algorithm called GeneClass for learning to predict gene regulatory response. Our approach is motivated by the hypothesis that in simple orga...
RECOMB
2004
Springer
15 years 23 days ago
2004
Springer
Abstract. In this study we propose a novel model for the representation of biological networks and provide algorithms for learning model parameters from experimental data. Our appr...
RECOMB
2004
Springer
15 years 23 days ago
2004
Springer
RECOMB
2004
Springer
15 years 23 days ago
2004
Springer
An efficient algorithm is presented for detecting approximate tandem repeats in genomic sequences. The algorithm is based on a flexible statistical model which allows a wide range...
RECOMB
2004
Springer
15 years 23 days ago
2004
Springer
RECOMB
2004
Springer
15 years 23 days ago
2004
Springer
We propose a novel, motion planning based approach to approximately map the energy landscape of an RNA molecule. Our method is based on the successful probabilistic roadmap motion...
RECOMB
2004
Springer
15 years 23 days ago
2004
Springer
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
RECOMB
2004
Springer
15 years 23 days ago
2004
Springer
Phylogenetic hidden Markov models (phylo-HMMs) have recently been proposed as a means for addressing a multispecies version of the ab initio gene prediction problem. These models ...
RECOMB
2004
Springer
15 years 23 days ago
2004
Springer
Transcriptional regulation is mediated by the coordinated binding of transcription factors to the upstream regions of genes. In higher eukaryotes, the binding sites of cooperating...