Sciweavers

DNA
2005
Springer
14 years 5 months ago
Two Proteins for the Price of One: The Design of Maximally Compressed Coding Sequences
Abstract. The emerging field of synthetic biology moves beyond conventional genetic manipulation to construct novel life forms which do not originate in nature. We explore the pro...
Bei Wang, Dimitris Papamichail, Steffen Mueller, S...
DNA
2005
Springer
148views Bioinformatics» more  DNA 2005»
14 years 5 months ago
Photo- and Thermoregulation of DNA Nanomachines
We have been investigating DNA state machines, especially those based on the opening of hairpin molecules in which state transitions are realized as hairpin loops are opened by mo...
Keiichiro Takahashi, Satsuki Yaegashi, Hiroyuki As...
DNA
2005
Springer
166views Bioinformatics» more  DNA 2005»
14 years 5 months ago
A Microfluidic Device for DNA Tile Self-assembly
In order to self-assemble desired DNA nanostructure, it is necessary to suppress assembly errors caused by fluctuations of temperature and concentration. We propose a microfluidic ...
Koutaro Somei, Shohei Kaneda, Teruo Fujii, Satoshi...
DNA
2005
Springer
113views Bioinformatics» more  DNA 2005»
14 years 5 months ago
A Self-assembly Model of Time-Dependent Glue Strength
Abstract Self-assembly is a ubiquitous process in which small objects selforganize into larger and complex structures. In 2000, Rothemund and Winfree proposed a Tile Assembly Model...
Sudheer Sahu, Peng Yin, John H. Reif
DNA
2005
Springer
117views Bioinformatics» more  DNA 2005»
14 years 5 months ago
Simple Operations for Gene Assembly
Abstract. The intramolecular model for gene assembly in ciliates considers three operations, ld, hi, and dlad that can assemble any gene pattern through folding and recombination: ...
Tero Harju, Ion Petre, Vladimir Rogojin, Grzegorz ...
DNA
2005
Springer
108views Bioinformatics» more  DNA 2005»
14 years 5 months ago
Sensitivity and Capacity of Microarray Encodings
Max H. Garzon, Vinhthuy T. Phan, Kiran C. Bobba, R...
DNA
2005
Springer
130views Bioinformatics» more  DNA 2005»
14 years 5 months ago
An Algorithm for SAT Without an Extraction Phase
An algorithm that could be implemented at a molecular level for solving the satisfiability of Boolean expressions is presented. This algorithm, based on properties of specific se...
Pierluigi Frisco, Christiaan Henkel, Szabolcs Teng...
DNA
2005
Springer
132views Bioinformatics» more  DNA 2005»
14 years 5 months ago
DNA Recombination by XPCR
The first step of the Adleman-Lipton extract model in DNA computing is the combinatorial generation of libraries. In this paper a new method is proposed for generating a initial p...
Giuditta Franco, Vincenzo Manca, Cinzia Giagulli, ...
DNA
2005
Springer
128views Bioinformatics» more  DNA 2005»
14 years 5 months ago
Recognizing DNA Splicing
Abstract. Motivated by recent techniques developed for observing evolutionary dynamics of a single DNA molecule, we introduce a formal model for accepting an observed behavior of a...
Matteo Cavaliere, Natasa Jonoska, Peter Leupold