BMCBI
2011
13 years 3 months ago
2011
Background: Results of phylogenetic analysis are often visualized as phylogenetic trees. Such a tree can typically only include up to a few hundred sequences. When more than a few...
BMCBI
2007
13 years 12 months ago
2007
Background: In Archeae and Bacteria, the repeated elements called CRISPRs for "clustered regularly interspaced short palindromic repeats" are believed to participate in ...
BMCBI
2006
13 years 12 months ago
2006
Background: We recently developed the Paired End diTag (PET) strategy for efficient characterization of mammalian transcriptomes and genomes. The paired end nature of short PET se...
BMCBI
2006
13 years 12 months ago
2006
Background: Genome sequences vary strongly in their repetitiveness and the causes for this are still debated. Here we propose a novel measure of genome repetitiveness, the index o...
BMCBI
2006
13 years 12 months ago
2006
Background: Chaos game representation of genome sequences has been used for visual representation of genome sequence patterns as well as alignment-free comparisons of sequences ba...
BMCBI
2010
13 years 12 months ago
2010
Background: New "next generation" DNA sequencing technologies offer individual researchers the ability to rapidly generate large amounts of genome sequence data at drama...
CSC
2006
14 years 1 months ago
2006
- A variety of data analysis concerned with genome sequences support the proposal that each living organism owns a genomic signature. Classical approaches to the genomic signature ...
CEC
2007
IEEE
14 years 3 months ago
2007
IEEE
Abstract-- Shotgun sequencing is the state-of-the-art to decode genome sequence. However this technique needs a lot of fragments. Combining those fragments correctly requires enorm...
FSTTCS
2003
Springer
14 years 5 months ago
2003
Springer
Computational genomics involves comparing sequences based on “similarity” for detecting evolutionary and functional relationships. Until very recently, available portions of th...