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    NAR
    2011
    225views Computer Vision» more  NAR 2011»
    IsoBase: a database of functionally related proteins across PPI networks
    13 years 2 months ago
    IsoBase: a database of functionally related proteins across PPI networks
    Download  nar.oxfordjournals.org
    We describe IsoBase, a database identifying functionally related proteins, across five major eukaryotic model organisms: Saccharomyces cerevisiae, Drosophila melanogaster, Caenorh...
    Daniel Park, Rohit Singh, Michael Baym, Chung-Shou...
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    NAR
    2011
    223views Computer Vision» more  NAR 2011»
    KUPS: constructing datasets of interacting and non-interacting protein pairs with associated attributions
    13 years 2 months ago
    KUPS: constructing datasets of interacting and non-interacting protein pairs with associated attributions
    Download  nar.oxfordjournals.org
    KUPS (The University of Kansas Proteomics Service) provides high-quality protein–protein interaction (PPI) data for researchers developing and evaluating computational models fo...
    Xue-wen Chen, Jong Cheol Jeong, Patrick Dermyer
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    BMCBI
    2011
    215views Artificial Intelligence» more  BMCBI 2011»
    Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis
    13 years 3 months ago
    Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis
    Download  www.biomedcentral.com
    Background: Combining multiple evidence-types from different information sources has the potential to reveal new relationships in biological systems. The integrated information ca...
    Artem Lysenko, Michael Defoin-Platel, Keywan Hassa...
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    BMCBI
    2011
    186views Artificial Intelligence» more  BMCBI 2011»
    Dr. PIAS: an integrative system for assessing the druggability of protein-protein interactions
    13 years 6 months ago
    Dr. PIAS: an integrative system for assessing the druggability of protein-protein interactions
    Download  www.biomedcentral.com
    Background: The amount of data on protein-protein interactions (PPIs) available in public databases and in the literature has rapidly expanded in recent years. PPI data can provid...
    Nobuyoshi Sugaya, Toshio Furuya
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    BMCBI
    2008
    134views more  BMCBI 2008»
    Identification of transcription factor contexts in literature using machine learning approaches
    13 years 11 months ago
    Identification of transcription factor contexts in literature using machine learning approaches
    Download  www.biomedcentral.com
    Background: Availability of information about transcription factors (TFs) is crucial for genome biology, as TFs play a central role in the regulation of gene expression. While man...
    Hui Yang, Goran Nenadic, John A. Keane
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