EMNLP
2006
13 years 9 months ago
2006
How can proteins fold so quickly into their unique native structures? We show here that there is a natural analogy between parsing and the protein folding problem, and demonstrate...
BIOCOMP
2006
13 years 9 months ago
2006
IMECS
2007
13 years 9 months ago
2007
—Proteins are the main players in the game of life. Good understanding of their structures, functions, and behaviors leads to good understanding of drugs, diseases, and thus our ...
BIOCOMP
2008
13 years 9 months ago
2008
We introduce a novel parameter called container flux, which is used to measure the information sharing capacity between two distinct nodes in a graph. Other useful information, bot...
EVOW
2008
Springer
13 years 9 months ago
2008
Springer
Many processes in the cell involve interaction among the proteins and determination of the networks of such interactions is of immense importance towards the complete understanding...
COMPGEOM
2005
ACM
13 years 9 months ago
2005
ACM
We present an efficient algorithm for maintaining the boundary and surface area of protein molecules as they undergo conformational changes. We also describe a robust implementati...
BIRD
2008
Springer
13 years 9 months ago
2008
Springer
Abstract. Protein-Protein Interaction (PPI) networks contain valuable information for the isolation of groups of proteins that participate in the same biological function. Many pro...
GCB
2006
Springer
13 years 11 months ago
2006
Springer
: In this paper we describe a similarity model that provides the objective basis for clustering proteins of similar structure. More specifically, we consider the following variant ...
CIKM
2006
Springer
13 years 11 months ago
2006
Springer
The ability to retrieve molecules based on structural similarity has use in many applications, from disease diagnosis and treatment to drug discovery and design. In this paper, we...
AIIA
2007
Springer
13 years 11 months ago
2007
Springer
One of the aims of modern Bioinformatics is to discover the molecular mechanisms that rule the protein operation. This would allow us to understand the complex processes involved i...