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CORR
2004
Springer
168views Education» more  CORR 2004»
13 years 9 months ago
Estimating Genome Reversal Distance by Genetic Algorithm
Sorting by reversals is an important problem in inferring the evolutionary relationship between two genomes. The problem of sorting unsigned permutation has been proven to be NP-ha...
Andy Auyeung, Ajith Abraham
JCB
2007
78views more  JCB 2007»
13 years 9 months ago
Sorting by Reciprocal Translocations via Reversals Theory
The understanding of genome rearrangements is an important endeavor in comparative genomics. A major computational problem in this field is finding a shortest sequence of genome...
Michal Ozery-Flato, Ron Shamir
FUIN
2008
103views more  FUIN 2008»
13 years 9 months ago
Implementing Sorting Networks with Spiking Neural P Systems
Spiking neural P systems simulate the behavior of neurons sending signals through axons. Recently, some applications concerning Boolean circuits and sorting algorithms have been pr...
Rodica Ceterchi, Alexandru Ioan Tomescu
4OR
2006
118views more  4OR 2006»
13 years 9 months ago
Dealing with inconsistent judgments in multiple criteria sorting models
Sorting models consist in assigning alternatives evaluated on several criteria to ordered categories. To implement such models it is necessary to set the values of the preference p...
Vincent Mousseau, Luis C. Dias, José Rui Fi...
CPHYSICS
2008
86views more  CPHYSICS 2008»
13 years 9 months ago
On ERI sorting for SIMD execution of large-scale Hartree-Fock SCF
Given the resurgent attractiveness of single-instruction-multiple-data (SIMD) processing, it is important for high-performance computing applications to be SIMD-capable. The Hartr...
Tirath Ramdas, Gregory K. Egan, David Abramson, Ki...
BMCBI
2010
134views more  BMCBI 2010»
13 years 9 months ago
BayesMotif: de novo protein sorting motif discovery from impure datasets
Background: Protein sorting is the process that newly synthesized proteins are transported to their target locations within or outside of the cell. This process is precisely regul...
Jianjun Hu, Fan Zhang
SAC
2010
ACM
13 years 9 months ago
Chemotaxis-based sorting of self-organizing heterotypic agents
Cell sorting is a fundamental phenomenon in morphogenesis, which is the process that leads to shape formation in living organisms. The sorting of heterotypic cell populations is p...
Manolya Eyiyurekli, Linge Bai, Peter I. Lelkes, Da...
AAAI
2010
13 years 11 months ago
Kernelized Sorting for Natural Language Processing
Kernelized sorting is an approach for matching objects from two sources (or domains) that does not require any prior notion of similarity between objects across the two sources. U...
Jagadeesh Jagarlamudi, Seth Juarez, Hal Daum&eacut...
SPAA
1995
ACM
14 years 1 months ago
Parallel Sorting with Limited Bandwidth
We study the problem of sorting on a parallel computer with limited communication bandwidth. By using the PRAM(m) model, where p processors communicate through a globally shared me...
Micah Adler, John W. Byers, Richard M. Karp
ACSC
2003
IEEE
14 years 1 months ago
Efficient Trie-Based Sorting of Large Sets of Strings
Sorting is a fundamental algorithmic task. Many generalpurpose sorting algorithms have been developed, but efficiency gains can be achieved by designing algorithms for specific ki...
Ranjan Sinha, Justin Zobel