subfamilies | Sciweavers

38

BMCBI
2002

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Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model app

13 years 11 months ago

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Background: Most profile and motif databases strive to classify protein sequences into a broad spectrum of protein families. The next step of such database studies should include ...

Kevin Truong, Mitsuhiko Ikura

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32

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BMCBI
2010

177views more BMCBI 2010»

Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets

13 years 11 months ago

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Background: Phylogenetic analysis can be used to divide a protein family into subfamilies in the absence of experimental information. Most phylogenetic analysis methods utilize mu...

Aydin Albayrak, Hasan H. Otu, Ugur O. Sezerman

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22

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ISMB
1996

90views Computational Biology» more ISMB 1996»

Discovering Patterns and Subfamilies in Biosequences

14 years 23 days ago

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Weconsider the problemof automaticdiscoveryof patterns and the corresponding subfamilies in a set of biosequences. Thesequences are unaligned and may contain noise of unknownlevel...

Alvis Brazma, Inge Jonassen, Esko Ukkonen, Jaak Vi...

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