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CANDC
2006
ACM

An RNA folding algorithm including pseudoknots based on dynamic weighted matching

13 years 11 months ago
An RNA folding algorithm including pseudoknots based on dynamic weighted matching
On the basis of maximum weighted matching (MWM) algorithm, we introduced a dynamic weight related with stem length and used a recursive algorithm to predict RNA secondary structures by searching the stem structure with maximum weight summation step-by-step. This algorithm not only avoids the complicated free energy calculation, but also it could attain higher prediction accuracy. Moreover, our algorithm can predict most types of potential pseudoknots in the RNA structure.
Haijun Liu, Dong Xu, Jianlin Shao, Yifei Wang
Added 11 Dec 2010
Updated 11 Dec 2010
Type Journal
Year 2006
Where CANDC
Authors Haijun Liu, Dong Xu, Jianlin Shao, Yifei Wang
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