SUPFAM: A database of sequence superfamilies of protein domains

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Background: SUPFAM database is a compilation of superfamily relationships between protein domain families of either known or unknown 3-D structure. In SUPFAM, sequence families from Pfam and structural families from SCOP are associated, using profile matching, to result in sequence superfamilies of known structure. Subsequently all-against-all family profile matches are made to deduce a list of new potential superfamilies of yet unknown structure.

Shashi B. Pandit, Rana Bhadra, V. S. Gowri, S. Bal

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3-d Structure | BMCBI 2004 | Protein Domain Families | Sequence Families |

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Added	16 Dec 2010
Updated	16 Dec 2010
Type	Journal
Year	2004
Where	BMCBI
Authors	Shashi B. Pandit, Rana Bhadra, V. S. Gowri, S. Balaji, B. Anand, Narayanaswamy Srinivasan

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SUPFAM: A database of sequence superfamilies of protein domains

3-d Structure | BMCBI 2004 | Protein Domain Families | Sequence Families |

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