This paper presents theoretical and experimental results for the estimation of large position and orientation inaccuracies during force-controlled compliant motion. This is a significant improvement over previous results. The estimation is based on position, velocity and force measurements. For large position and orientation inaccuracies, the non-linear estimation problem is not satisfactorily solved by existing Kalman filters. Therefore, a new Bayesian estimator is derived. The filter is derived independently of our application and is valid for static systems (parameter estimation) with any kind of non-linear measurement equation subject to Gaussian measurement uncertainty and for a limited class of dynamic systems. Experimental results for the estimation of the inaccurately known positions and orientations of contacting objects during autonomous compliant motion are presented.