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» A Bayesian approach to protein model quality assessment
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RECOMB
2008
Springer
14 years 8 months ago
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes
The transcriptional regulatory sequences in metazoan genomes often consist of multiple cis-regulatory modules (CRMs). Each CRM contains locally enriched occurrences of binding site...
Tien-ho Lin, Pradipta Ray, Geir Kjetil Sandve, Sel...
BMCBI
2007
135views more  BMCBI 2007»
13 years 7 months ago
Sequence similarity is more relevant than species specificity in probabilistic backtranslation
Background: Backtranslation is the process of decoding a sequence of amino acids into the corresponding codons. All synthetic gene design systems include a backtranslation module....
Alfredo Ferro, Rosalba Giugno, Giuseppe Pigola, Al...
ISMB
2001
13 years 9 months ago
Using mixtures of common ancestors for estimating the probabilities of discrete events in biological sequences
Accurately estimating probabilities from observations is important for probabilistic-based approaches to problems in computational biology. In this paper we present a biologically...
Eleazar Eskin, William Noble Grundy, Yoram Singer
DASFAA
2006
IEEE
109views Database» more  DASFAA 2006»
14 years 1 months ago
Assessing the Completeness of Sensor Data
In this paper we present a quality model highlighting the completeness of sensor data with respect to its application. The model allows consistent handling of information loss as d...
Jit Biswas, Felix Naumann, Qiang Qiu
ATAL
2003
Springer
14 years 27 days ago
Minimizing communication cost in a distributed Bayesian network using a decentralized MDP
In complex distributed applications, a problem is often decomposed into a set of subproblems that are distributed to multiple agents. We formulate this class of problems with a tw...
Jiaying Shen, Victor R. Lesser, Norman Carver