The simultaneity matrix is an × matrix of numbers. It is constructed according to a set of -bit solutions. The matrix element mij is the degree of linkage between bit positions i ...
Background: In a previous report (La et al., Proteins, 2005), we have demonstrated that the identification of phylogenetic motifs, protein sequence fragments conserving the overal...
Netlist partitioning is an important and well studied problem. In this paper, a linear time partitioning approach based on iterative deletion is presented. We use the partitioning...
Background: The identification of local similarities between two protein structures can provide clues of a common function. Many different methods exist for searching for similar ...
: A method for determining consensus of hierarchical incomplete ordered partitions and coverings of sets is presented in this chapter. Incomplete ordered partitions and coverings a...