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BMCBI
2007
160views more  BMCBI 2007»
13 years 7 months ago
Convergent algorithms for protein structural alignment
Background: Many algorithms exist for protein structural alignment, based on internal protein coordinates or on explicit superposition of the structures. These methods are usually...
Leandro Martínez, Roberto Andreani, Jos&eac...
BMCBI
2008
153views more  BMCBI 2008»
13 years 7 months ago
Estimating the size of the solution space of metabolic networks
Background: Cellular metabolism is one of the most investigated system of biological interactions. While the topological nature of individual reactions and pathways in the network...
Alfredo Braunstein, Roberto Mulet, Andrea Pagnani
CORR
2010
Springer
116views Education» more  CORR 2010»
13 years 7 months ago
Dist-Orc: A Rewriting-based Distributed Implementation of Orc with Formal Analysis
Abstract. Orc is a theory of orchestration of services that allows structured programming of distributed and timed computations. Several formal semantics have been proposed for Orc...
Musab AlTurki, José Meseguer
CORR
2010
Springer
115views Education» more  CORR 2010»
13 years 7 months ago
The complexity of solving reachability games using value and strategy iteration
Concurrent reachability games is a class of games heavily studied by the computer science community, in particular by the formal methods community. Two standard algorithms for app...
Kristoffer Arnsfelt Hansen, Rasmus Ibsen-Jensen, P...
CORR
2008
Springer
141views Education» more  CORR 2008»
13 years 7 months ago
Distributed Source Coding using Abelian Group Codes
In this work, we consider a distributed source coding problem with a joint distortion criterion depending on the sources and the reconstruction. This includes as a special case the...
Dinesh Krithivasan, S. Sandeep Pradhan