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BMCBI
2007
95views more  BMCBI 2007»
13 years 6 months ago
Phylogenetic tree information aids supervised learning for predicting protein-protein interaction based on distance matrices
Background: Protein-protein interactions are critical for cellular functions. Recently developed computational approaches for predicting protein-protein interactions utilize co-ev...
Roger A. Craig, Li Liao
IJON
2008
116views more  IJON 2008»
13 years 6 months ago
Evolutionary ensemble of diverse artificial neural networks using speciation
Recently, many researchers have designed neural network architectures with evolutionary algorithms but most of them have used only the fittest solution of the last generation. To ...
Kyung-Joong Kim, Sung-Bae Cho
BMCBI
2008
142views more  BMCBI 2008»
13 years 6 months ago
Strategies for measuring evolutionary conservation of RNA secondary structures
Background: Evolutionary conservation of RNA secondary structure is a typical feature of many functional non-coding RNAs. Since almost all of the available methods used for predic...
Andreas R. Gruber, Stephan H. F. Bernhart, Ivo L. ...
ISMB
2003
13 years 8 months ago
Deriving phylogenetic trees from the similarity analysis of metabolic pathways
Comparative analysis of metabolic pathways in different genomes can give insights into the understanding of evolutionary and organizational relationships among species. This type ...
Maureen Heymans, Ambuj K. Singh
GECCO
2010
Springer
172views Optimization» more  GECCO 2010»
13 years 11 months ago
Designing better fitness functions for automated program repair
Evolutionary methods have been used to repair programs automatically, with promising results. However, the fitness function used to achieve these results was based on a few simpl...
Ethan Fast, Claire Le Goues, Stephanie Forrest, We...