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BMCBI
2008
125views more  BMCBI 2008»
13 years 6 months ago
A fast algorithm for the multiple genome rearrangement problem with weighted reversals and transpositions
Background: Due to recent progress in genome sequencing, more and more data for phylogenetic reconstruction based on rearrangement distances between genomes become available. Howe...
Martin Bader, Mohamed Ibrahim Abouelhoda, Enno Ohl...
CPC
2002
80views more  CPC 2002»
13 years 6 months ago
The Wiener Index Of Random Trees
The Wiener index is analyzed for random recursive trees and random binary search trees in the uniform probabilistic models. We obtain the expectations, asymptotics for the varianc...
Ralph Neininger
IFIP12
2008
13 years 8 months ago
Optimizing Relationships Information in Repertory Grids
The Repertory Grid method is widely used in knowledge engineering to infer functional relationships between constructs given by an expert. The method is ignoring information that c...
Enrique Calot, Paola Britos, Ramón Garc&iac...
SODA
2003
ACM
142views Algorithms» more  SODA 2003»
13 years 8 months ago
The similarity metric
—A new class of distances appropriate for measuring similarity relations between sequences, say one type of similarity per distance, is studied. We propose a new “normalized in...
Ming Li, Xin Chen, Xin Li, Bin Ma, Paul M. B. Vit&...
CIBCB
2007
IEEE
14 years 1 months ago
An Experimental Evaluation of Inversion-and Transposition-Based Genomic Distances through Simulations
— Rearrangements of genes and other syntenic blocks have become a topic of intensive study by phylogenists, comparative genomicists, and computational biologists: they are a feat...
Moulik Kothari, Bernard M. E. Moret