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» A Graph Theoretic Approach to Protein Structure Selection
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SIGMOD
2004
ACM
162views Database» more  SIGMOD 2004»
14 years 8 months ago
Graph Indexing: A Frequent Structure-based Approach
Graph has become increasingly important in modelling complicated structures and schemaless data such as proteins, chemical compounds, and XML documents. Given a graph query, it is...
Xifeng Yan, Philip S. Yu, Jiawei Han
BMCBI
2007
109views more  BMCBI 2007»
13 years 8 months ago
A domain-based approach to predict protein-protein interactions
Background: Knowing which proteins exist in a certain organism or cell type and how these proteins interact with each other are necessary for the understanding of biological proce...
Mudita Singhal, Haluk Resat
IEEESCC
2009
IEEE
13 years 6 months ago
Theoretical Framework for Eliminating Redundancy in Workflows
In this paper we look at combining and compressing a set of workflows, such that computation can be minimized. In this context, we look at two novel theoretical problems with appl...
Dhrubajyoti Saha, Abhishek Samanta, Smruti R. Sara...
ALMOB
2006
109views more  ALMOB 2006»
13 years 8 months ago
A novel functional module detection algorithm for protein-protein interaction networks
Background: The sparse connectivity of protein-protein interaction data sets makes identification of functional modules challenging. The purpose of this study is to critically eva...
Woochang Hwang, Young-Rae Cho, Aidong Zhang, Mural...
CGO
2006
IEEE
14 years 2 months ago
Selecting Software Phase Markers with Code Structure Analysis
Most programs are repetitive, where similar behavior can be seen at different execution times. Algorithms have been proposed that automatically group similar portions of a program...
Jeremy Lau, Erez Perelman, Brad Calder