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» A Graph Theoretic Approach to Protein Structure Selection
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ISCAS
1994
IEEE
104views Hardware» more  ISCAS 1994»
14 years 21 days ago
A Graph-Theoretic Approach to Clock Skew Optimization
This paper addresses the problem of minimizing the clock period of a circuit by optimizingthe clock skews. We incorporate uncertainty factors and present a formulation that ensure...
Rahul B. Deokar, Sachin S. Sapatnekar
JMLR
2010
136views more  JMLR 2010»
13 years 3 months ago
Predicting the functions of proteins in Protein-Protein Interaction networks from global information
In this work we present a novel approach to predict the function of proteins in protein-protein interaction (PPI) networks. We classify existing approaches into inductive and tran...
Hossein Rahmani, Hendrik Blockeel, Andreas Bender
ICDE
2007
IEEE
167views Database» more  ICDE 2007»
14 years 10 months ago
GString: A Novel Approach for Efficient Search in Graph Databases
Graphs are widely used for modeling complicated data, including chemical compounds, protein interactions, XML documents, and multimedia. Information retrieval against such data ca...
Haoliang Jiang, Haixun Wang, Philip S. Yu, Shuigen...
BMCBI
2008
135views more  BMCBI 2008»
13 years 8 months ago
Functional site prediction selects correct protein models
Background: The prediction of protein structure can be facilitated by the use of constraints based on a knowledge of functional sites. Without this information it is still possibl...
Vijayalakshmi Chelliah, William R. Taylor
IJCNN
2008
IEEE
14 years 3 months ago
On the sample mean of graphs
— We present an analytic and geometric view of the sample mean of graphs. The theoretical framework yields efficient subgradient methods for approximating a structural mean and ...
Brijnesh J. Jain, Klaus Obermayer