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» A Java-Based Distributed Genetic Algorithm Framework
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BCB
2010
140views Bioinformatics» more  BCB 2010»
13 years 2 months ago
Guiding belief propagation using domain knowledge for protein-structure determination
A major bottleneck in high-throughput protein crystallography is producing protein-structure models from an electrondensity map. In previous work, we developed Acmi, a probabilist...
Ameet Soni, Craig A. Bingman, Jude W. Shavlik
FOCS
1992
IEEE
13 years 11 months ago
Quadratic Dynamical Systems (Preliminary Version)
The main purpose of this paper is to promote the study of computational aspects, primarily the convergence rate, of nonlinear dynamical systems from a combinatorial perspective. W...
Yuri Rabinovich, Alistair Sinclair, Avi Wigderson
BMCBI
2007
123views more  BMCBI 2007»
13 years 7 months ago
BIRCH: A user-oriented, locally-customizable, bioinformatics system
Background: Molecular biologists need sophisticated analytical tools which often demand extensive computational resources. While finding, installing, and using these tools can be ...
Brian Fristensky
GPEM
2002
95views more  GPEM 2002»
13 years 7 months ago
On Appropriate Adaptation Levels for the Learning of Gene Linkage
A number of algorithms have been proposed aimed at tackling the problem of learning "Gene Linkage" within the context of genetic optimisation, that is to say, the problem...
James Smith
CCS
2009
ACM
14 years 2 months ago
Privacy-preserving genomic computation through program specialization
In this paper, we present a new approach to performing important classes of genomic computations (e.g., search for homologous genes) that makes a significant step towards privacy...
Rui Wang, XiaoFeng Wang, Zhou Li, Haixu Tang, Mich...