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BMCBI
2004
119views more  BMCBI 2004»
13 years 9 months ago
Genome SEGE: A database for 'intronless' genes in eukaryotic genomes
Background: A number of completely sequenced eukaryotic genome data are available in the public domain. Eukaryotic genes are either 'intron containing' or 'intronle...
Meena K. Sakharkar, Pandjassarame Kangueane
BMCBI
2002
126views more  BMCBI 2002»
13 years 9 months ago
RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologs
Background: When analyzing protein sequences using sequence similarity searches, orthologous sequences (that diverged by speciation) are more reliable predictors of a new protein&...
Christian M. Zmasek, Sean R. Eddy
ACL
2010
13 years 7 months ago
Hunting for the Black Swan: Risk Mining from Text
In the business world, analyzing and dealing with risk permeates all decisions and actions. However, to date, risk identification, the first step in the risk management cycle, has...
Jochen L. Leidner, Frank Schilder
SIGMOD
2008
ACM
215views Database» more  SIGMOD 2008»
14 years 9 months ago
CSV: visualizing and mining cohesive subgraphs
Extracting dense sub-components from graphs efficiently is an important objective in a wide range of application domains ranging from social network analysis to biological network...
Nan Wang, Srinivasan Parthasarathy, Kian-Lee Tan, ...
DEXA
2007
Springer
154views Database» more  DEXA 2007»
14 years 3 months ago
Beyond Lazy XML Parsing
XML has become the standard format for data representation and exchange in domains ranging from Web to desktop applications. However, wide adoption of XML is hindered by inefficien...
Fernando Farfán, Vagelis Hristidis, Raju Ra...