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CIDR
2009
129views Algorithms» more  CIDR 2009»
13 years 9 months ago
Extracting and Querying a Comprehensive Web Database
Recent research in domain-independent information extraction holds the promise of an automatically-constructed structured database derived from the Web. A query system based on th...
Michael J. Cafarella
ACMDIS
2010
ACM
13 years 8 months ago
The CLOTHO project: predicting application utility
When using the computer, each user has some notion that "these applications are important" at a given point in time. We term this subset of applications that the user va...
Joshua M. Hailpern, Nicholas Jitkoff, Joseph Subid...
BMCBI
2010
72views more  BMCBI 2010»
13 years 8 months ago
Potentials 'R'Us web-server for protein energy estimations with coarse-grained knowledge-based potentials
Background: Knowledge-based potentials have been widely used in the last 20 years for fold recognition, protein structure prediction from amino acid sequence, ligand binding, prot...
Yaping Feng, Andrzej Kloczkowski, Robert L. Jernig...
BMCBI
2007
141views more  BMCBI 2007»
13 years 8 months ago
HeliCis: a DNA motif discovery tool for colocalized motif pairs with periodic spacing
Background: Correct temporal and spatial gene expression during metazoan development relies on combinatorial interactions between different transcription factors. As a consequence...
Erik Larsson, Per Lindahl, Petter Mostad
BMCBI
2006
130views more  BMCBI 2006»
13 years 8 months ago
Docking protein domains in contact space
Background: Many biological processes involve the physical interaction between protein domains. Understanding these functional associations requires knowledge of the molecular str...
Stefano Lise, Alice Walker-Taylor, David T. Jones
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