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» A Relational Abstraction for Functions
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BMCBI
2007
97views more  BMCBI 2007»
13 years 10 months ago
Relating destabilizing regions to known functional sites in proteins
Background: Most methods for predicting functional sites in protein 3D structures, rely on information on related proteins and cannot be applied to proteins with no known relative...
Benoit H. Dessailly, Marc F. Lensink, Shoshana J. ...
TAP
2010
Springer
132views Hardware» more  TAP 2010»
14 years 3 months ago
Relational Analysis of (Co)inductive Predicates, (Co)algebraic Datatypes, and (Co)recursive Functions
This paper presents techniques for applying a finite relational model finder to logical specifications that involve (co)inductive predicates, (co)algebraic datatypes, and (co)re...
Jasmin Christian Blanchette
JC
2008
53views more  JC 2008»
13 years 10 months ago
Relative widths of smooth functions determined by fractional order derivatives
For two subsets W and V of a normed space X. The relative Kolmogorov n-width of W relative to V in X is defined by Kn(W, V )X := inf Ln sup f W inf gV Ln f - g X, where the infimu...
Liu Yongping, Yang Lianhong
EMNLP
2008
13 years 11 months ago
It's a Contradiction - no, it's not: A Case Study using Functional Relations
Contradiction Detection (CD) in text is a difficult NLP task. We investigate CD over functions (e.g., BornIn(Person)=Place), and present a domain-independent algorithm that automa...
Alan Ritter, Stephen Soderland, Doug Downey, Oren ...
BMCBI
2010
177views more  BMCBI 2010»
13 years 10 months ago
Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets
Background: Phylogenetic analysis can be used to divide a protein family into subfamilies in the absence of experimental information. Most phylogenetic analysis methods utilize mu...
Aydin Albayrak, Hasan H. Otu, Ugur O. Sezerman