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» A Smith-Waterman Systolic Cell
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CF
2009
ACM
14 years 2 months ago
Quantitative analysis of sequence alignment applications on multiprocessor architectures
The exponential growth of databases that contains biological information (such as protein and DNA data) demands great efforts to improve the performance of computational platforms...
Friman Sánchez, Alex Ramírez, Mateo ...
RECOMB
2002
Springer
14 years 7 months ago
Combining pairwise sequence similarity and support vector machines for remote protein homology detection
One key element in understanding the molecular machinery of the cell is to understand the meaning, or function, of each protein encoded in the genome. A very successful means of i...
Li Liao, William Stafford Noble
ARITH
2003
IEEE
14 years 23 days ago
A Low Complexity and a Low Latency Bit Parallel Systolic Multiplier over GF(2m) Using an Optimal Normal Basis of Type II
Using the self duality of an optimal normal basis (ONB) of type II, we present a bit parallel systolic multiplier over GF(2m ) which has a low hardware complexity and a low latenc...
Soonhak Kwon
ARITH
2005
IEEE
13 years 9 months ago
Long Number Bit-Serial Squarers
New bit serial squarers for long numbers in LSB first form, are presented in this paper. The first presented scheme is a 50% operational efficient squarer than has the half number...
E. Chaniotakis, Paraskevas Kalivas, Kiamal Z. Pekm...
DFT
2006
IEEE
143views VLSI» more  DFT 2006»
14 years 1 months ago
Defect Tolerant and Energy Economized DSP Plane of a 3-D Heterogeneous SoC
This paper1 discusses a defect tolerant and energy economized computing array for the DSP plane of a 3-D Heterogeneous System on a Chip. We present the J-platform, which employs c...
Vijay K. Jain, Glenn H. Chapman