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» A Spectral Algorithm for Learning Hidden Markov Models
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BMCBI
2005
141views more  BMCBI 2005»
13 years 7 months ago
A method for the prediction of GPCRs coupling specificity to G-proteins using refined profile Hidden Markov Models
Background: G- Protein coupled receptors (GPCRs) comprise the largest group of eukaryotic cell surface receptors with great pharmacological interest. A broad range of native ligan...
Nikolaos G. Sgourakis, Pantelis G. Bagos, Panagiot...
ISMIR
2003
Springer
133views Music» more  ISMIR 2003»
14 years 24 days ago
Chord segmentation and recognition using EM-trained hidden markov models
Automatic extraction of content description from commercial audio recordings has a number of important applications, from indexing and retrieval through to novel musicological ana...
Alexander Sheh, Daniel P. W. Ellis
BMCBI
2007
94views more  BMCBI 2007»
13 years 7 months ago
A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays
Background: Affymetrix SNP arrays can interrogate thousands of SNPs at the same time. This allows us to look at the genomic content of cancer cells and to investigate the underlyi...
Philippe Lamy, Claus L. Andersen, Lars Dyrskjot, N...
BMCBI
2006
156views more  BMCBI 2006»
13 years 7 months ago
Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models
Background: Horizontal gene transfer (HGT) is considered a strong evolutionary force shaping the content of microbial genomes in a substantial manner. It is the difference in spee...
Stephan Waack, Oliver Keller, Roman Asper, Thomas ...
ICML
2005
IEEE
14 years 8 months ago
Fast inference and learning in large-state-space HMMs
For Hidden Markov Models (HMMs) with fully connected transition models, the three fundamental problems of evaluating the likelihood of an observation sequence, estimating an optim...
Sajid M. Siddiqi, Andrew W. Moore