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» A Study of Collaboration in Software Design
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EDBT
2010
ACM
145views Database» more  EDBT 2010»
13 years 11 months ago
Splash: ad-hoc querying of data and statistical models
Data mining is increasingly performed by people who are not computer scientists or professional programmers. It is often done as an iterative process involving multiple ad-hoc tas...
Lujun Fang, Kristen LeFevre
BMCBI
2007
239views more  BMCBI 2007»
13 years 7 months ago
Pre-processing Agilent microarray data
Background: Pre-processing methods for two-sample long oligonucleotide arrays, specifically the Agilent technology, have not been extensively studied. The goal of this study is to...
Marianna Zahurak, Giovanni Parmigiani, Wayne Yu, R...
BMCBI
2005
132views more  BMCBI 2005»
13 years 7 months ago
CLPM: A Cross-Linked Peptide Mapping Algorithm for Mass Spectrometric Analysis
Background: Protein-protein, protein-DNA and protein-RNA interactions are of central importance in biological systems. Quadrapole Time-of-flight (Q-TOF) mass spectrometry is a sen...
Yong Tang, Yingfeng Chen, Cheryl F. Lichti, Roger ...
BMCBI
2004
139views more  BMCBI 2004»
13 years 7 months ago
Resolution of large and small differences in gene expression using models for the Bayesian analysis of gene expression levels an
Background: The detection of small yet statistically significant differences in gene expression in spotted DNA microarray studies is an ongoing challenge. Meeting this challenge r...
Jeffrey P. Townsend
SOFTVIS
2010
ACM
13 years 5 months ago
Dependence cluster visualization
Large clusters of mutual dependence have long been regarded as a problem impeding comprehension, testing, maintenance, and reverse engineering. An effective visualization can aid ...
Syed S. Islam, Jens Krinke, David Binkley