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BMCBI
2007
116views more  BMCBI 2007»
13 years 9 months ago
primetv: a viewer for reconciled trees
Background: Evolutionary processes, such as gene family evolution or parasite-host cospeciation, can often be viewed as a tree evolving inside another tree. Relating two given tre...
Bengt Sennblad, Eva Schreil, Ann-Charlotte Berglun...
SODA
2003
ACM
119views Algorithms» more  SODA 2003»
13 years 10 months ago
Simultaneous optimization for concave costs: single sink aggregation or single source buy-at-bulk
We consider the problem of finding efficient trees to send information from k sources to a single sink in a network where information can be aggregated at intermediate nodes in t...
Ashish Goel, Deborah Estrin
BMCBI
2011
13 years 3 months ago
Analysis on the reconstruction accuracy of the Fitch method for inferring ancestral states
Background: As one of the most widely used parsimony methods for ancestral reconstruction, the Fitch method minimizes the total number of hypothetical substitutions along all bran...
Jialiang Yang, Jun Li, Liuhuan Dong, Stefan Gr&uum...
ISCC
2003
IEEE
130views Communications» more  ISCC 2003»
14 years 2 months ago
Balanced Batch LKH: New Proposal, Implementation and Performance Evaluation
Perfect Secrecy can only be achieved in multicast groups by ciphering data sent to the group with a different key every time a member joins or leaves the group. A Key Server must ...
Josep Pegueroles, Francisco Rico-Novella
STOC
2006
ACM
129views Algorithms» more  STOC 2006»
14 years 9 months ago
Optimal phylogenetic reconstruction
One of the major tasks of evolutionary biology is the reconstruction of phylogenetic trees from molecular data. The evolutionary model is given by a Markov chain on the true evolu...
Constantinos Daskalakis, Elchanan Mossel, Sé...