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BMCBI
2008
101views more  BMCBI 2008»
15 years 6 months ago
Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related
Background: For many types of analyses, data about gene structure and locations of non-coding regions of genes are required. Although a vast amount of genomic sequence data is ava...
Oliver Keller, Florian Odronitz, Mario Stanke, Mar...
BMCBI
2008
153views more  BMCBI 2008»
15 years 6 months ago
How to make the most of NE dictionaries in statistical NER
Background: When term ambiguity and variability are very high, dictionary-based Named Entity Recognition (NER) is not an ideal solution even though large-scale terminological reso...
Yutaka Sasaki, Yoshimasa Tsuruoka, John McNaught, ...
CORR
2008
Springer
141views Education» more  CORR 2008»
15 years 6 months ago
Model checking memoryful linear-time logics over one-counter automata
We study complexity of the model-checking problems for LTL with registers (also known as freeze LTL and written LTL ) and for first-order logic with data equality tests (written F...
Stéphane Demri, Ranko Lazic, Arnaud Sangnie...
SIAMSC
2008
148views more  SIAMSC 2008»
15 years 5 months ago
Multilevel Adaptive Aggregation for Markov Chains, with Application to Web Ranking
A multilevel adaptive aggregation method for calculating the stationary probability vector of an irreducible stochastic matrix is described. The method is a special case of the ada...
Hans De Sterck, Thomas A. Manteuffel, Stephen F. M...
SIAMSC
2008
140views more  SIAMSC 2008»
15 years 5 months ago
Newton-GMRES Preconditioning for Discontinuous Galerkin Discretizations of the Navier--Stokes Equations
We study preconditioners for the iterative solution of the linear systems arising in the implicit time integration of the compressible Navier-Stokes equations. The spatial discreti...
Per-Olof Persson, Jaime Peraire