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    BMCBI
    2007
    166views more  BMCBI 2007»
    PathFinder: mining signal transduction pathway segments from protein-protein interaction networks
    13 years 8 months ago
    PathFinder: mining signal transduction pathway segments from protein-protein interaction networks
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    Background: A Signal transduction pathway is the chain of processes by which a cell converts an extracellular signal into a response. In most unicellular organisms, the number of ...
    Gürkan Bebek, Jiong Yang
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    BMCBI
    2008
    118views more  BMCBI 2008»
    Drug interaction prediction using ontology-driven hypothetical assertion framework for pathway generation followed by numerical
    13 years 8 months ago
    Drug interaction prediction using ontology-driven hypothetical assertion framework for pathway generation followed by numerical
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    Background: In accordance with the increasing amount of information concerning individual differences in drug response and molecular interaction, the role of in silico prediction ...
    Takeshi Arikuma, Sumi Yoshikawa, Ryuzo Azuma, Kent...
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    JSW
    2008
    145views more  JSW 2008»
    Analysis and Visualization of Gene Expressions and Protein Structures
    13 years 7 months ago
    Analysis and Visualization of Gene Expressions and Protein Structures
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    This paper describes a web-based interactive framework for the analysis and visualization of gene expressions and protein structures. The formulation of the proposed framework was ...
    Ashraf S. Hussein
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    BMCBI
    2007
    130views more  BMCBI 2007»
    A model-based optimization framework for the inference of regulatory interactions using time-course DNA microarray expression da
    13 years 8 months ago
    A model-based optimization framework for the inference of regulatory interactions using time-course DNA microarray expression da
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    Background: Proteins are the primary regulatory agents of transcription even though mRNA expression data alone, from systems like DNA microarrays, are widely used. In addition, th...
    Reuben Thomas, Carlos J. Paredes, Sanjay Mehrotra,...
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    ICCS
    2007
    Springer
    138views Applied Computing» more  ICCS 2007»
    A Multiscale, Cell-Based Framework for Modeling Cancer Development
    14 years 2 months ago
    A Multiscale, Cell-Based Framework for Modeling Cancer Development
    Download  math.lanl.gov
    We use a systems approach to develop a predictive model that medical researchers can use to study and treat cancerous tumors. Our multiscale, cell-based model includes intracellula...
    Yi Jiang
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