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BMCBI
2008
114views more  BMCBI 2008»
13 years 7 months ago
Dinucleotide controlled null models for comparative RNA gene prediction
Background: Comparative prediction of RNA structures can be used to identify functional noncoding RNAs in genomic screens. It was shown recently by Babak et al. [BMC Bioinformatic...
Tanja Gesell, Stefan Washietl
BMCBI
2011
12 years 11 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes
ICCAD
2002
IEEE
142views Hardware» more  ICCAD 2002»
14 years 4 months ago
SAT and ATPG: Boolean engines for formal hardware verification
In this survey, we outline basic SAT- and ATPGprocedures as well as their applications in formal hardware verification. We attempt to give the reader a trace trough literature and...
Armin Biere, Wolfgang Kunz
INFOCOM
2008
IEEE
14 years 2 months ago
On Reducing Mesh Delay for Peer-to-Peer Live Streaming
—Peer-to-peer (P2P) technology has emerged as a promising scalable solution for live streaming to large group. In this paper, we address the design of overlay which achieves low ...
Dongni Ren, Y.-T. Hillman Li, Shueng-Han Gary Chan
DATE
2008
IEEE
143views Hardware» more  DATE 2008»
14 years 2 months ago
Improving Synthesis of Compressor Trees on FPGAs via Integer Linear Programming
Multi-input addition is an important operation for many DSP and video processing applications. On FPGAs, multi-input addition has traditionally been implemented using trees of car...
Hadi Parandeh-Afshar, Philip Brisk, Paolo Ienne