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CSB
2003
IEEE
176views Bioinformatics» more  CSB 2003»
14 years 6 days ago
3D Structural Homology Detection via Unassigned Residual Dipolar Couplings
Recognition of a protein’s fold provides valuable information about its function. While many sequence-based homology prediction methods exist, an important challenge remains: tw...
Christopher James Langmead, Bruce Randall Donald
BMCBI
2004
93views more  BMCBI 2004»
13 years 6 months ago
Predicting binding sites of hydrolase-inhibitor complexes by combining several methods
Background: Protein-protein interactions play a critical role in protein function. Completion of many genomes is being followed rapidly by major efforts to identify interacting pr...
Taner Z. Sen, Andrzej Kloczkowski, Robert L. Jerni...
CSB
2004
IEEE
177views Bioinformatics» more  CSB 2004»
13 years 10 months ago
High-Throughput 3D Structural Homology Detection via NMR Resonance Assignment
One goal of the structural genomics initiative is the identification of new protein folds. Sequence-based structural homology prediction methods are an important means for priorit...
Christopher James Langmead, Bruce Randall Donald
EEE
2005
IEEE
14 years 16 days ago
Learning the Kernel Matrix for XML Document Clustering
The rapid growth of XML adoption has urged for the need of a proper representation for semi-structured documents, where the document structural information has to be taken into ac...
Jianwu Yang, William Kwok-Wai Cheung, Xiaoou Chen
BMCBI
2007
112views more  BMCBI 2007»
13 years 7 months ago
PFAAT version 2.0: A tool for editing, annotating, and analyzing multiple sequence alignments
Background: By virtue of their shared ancestry, homologous sequences are similar in their structure and function. Consequently, multiple sequence alignments are routinely used to ...
Daniel R. Caffrey, Paul H. Dana, Vidhya Mathur, Ma...