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RECOMB
2007
Springer
16 years 4 months ago
Pairwise Global Alignment of Protein Interaction Networks by Matching Neighborhood Topology
We describe an algorithm, IsoRank, for global alignment of two protein-protein interaction (PPI) networks. IsoRank aims to maximize the overall match between the two networks; in c...
Rohit Singh, Jinbo Xu, Bonnie Berger
RECOMB
2004
Springer
16 years 4 months ago
Predicting Genetic Regulatory Response Using Classification: Yeast Stress Response
We present a novel classification-based algorithm called GeneClass for learning to predict gene regulatory response. Our approach is motivated by the hypothesis that in simple orga...
Manuel Middendorf, Anshul Kundaje, Chris Wiggins, ...
SIGMOD
2009
ACM
144views Database» more  SIGMOD 2009»
16 years 4 months ago
Do we mean the same?: disambiguation of extracted keyword queries for database search
Users often try to accumulate information on a topic of interest from multiple information sources. In this case a user's informational need might be expressed in terms of an...
Elena Demidova, Irina Oelze, Peter Fankhauser
SIGMOD
2009
ACM
215views Database» more  SIGMOD 2009»
16 years 4 months ago
Efficient type-ahead search on relational data: a TASTIER approach
Existing keyword-search systems in relational databases require users to submit a complete query to compute answers. Often users feel "left in the dark" when they have l...
Guoliang Li, Shengyue Ji, Chen Li, Jianhua Feng
SIGMOD
2008
ACM
95views Database» more  SIGMOD 2008»
16 years 4 months ago
Interactive generation of integrated schemas
Schema integration is the problem of creating a unified target schema based on a set of existing source schemas that relate to each other via specified correspondences. The unifie...
Laura Chiticariu, Phokion G. Kolaitis, Lucian Popa
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