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» A new approach to fragment assembly in DNA sequencing
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BMCBI
2010
141views more  BMCBI 2010»
13 years 6 months ago
BioPhysConnectoR: Connecting Sequence Information and Biophysical Models
Background: One of the most challenging aspects of biomolecular systems is the understanding of the coevolution in and among the molecule(s). A complete, theoretical picture of th...
Franziska Hoffgaard, Philipp Weil, Kay Hamacher
IFIP12
2009
13 years 4 months ago
Unification of Heterogeneous Data Towards the Prediction of Oral Cancer Reoccurrence
Oral cancer is the predominant neoplasm of the head and neck. Annually, more than 500.000 new cases of oral cancer are reported, worldwide. After the initial treatment of cancer an...
Costas P. Exarchos, Yorgos Goletsis, Dimitrios I. ...
BMCBI
2007
124views more  BMCBI 2007»
13 years 6 months ago
CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats
Background: Clustered Regularly Interspaced Palindromic Repeats (CRISPRs) are a novel type of direct repeat found in a wide range of bacteria and archaea. CRISPRs are beginning to...
Charles Bland, Teresa L. Ramsey, Fareedah Sabree, ...
WOB
2004
134views Bioinformatics» more  WOB 2004»
13 years 8 months ago
Reconstruction of Phylogenetic Trees using the Ant Colony Optimization Paradigm
We developed a new approach for the reconstruction of phylogenetic trees using ant colony optimization metaheuristics.Atree is constructed using a fully connected graph and the pro...
Heitor S. Lopes, Mauricio Perretto
CLADE
2008
IEEE
14 years 1 months ago
SWARM: a scientific workflow for supporting bayesian approaches to improve metabolic models
With the exponential growth of complete genome sequences, the analysis of these sequences is becoming a powerful approach to build genome-scale metabolic models. These models can ...
Xinghua Shi, Rick Stevens