78 search results - page 5 / 16 » A novel approach to phylogenetic tree construction using sto... |
BMCBI
2007
13 years 7 months ago
2007
Background: Phylogenetic profiles record the occurrence of homologs of genes across fully sequenced organisms. Proteins with similar profiles are typically components of protein c...
BMCBI
2008
13 years 7 months ago
2008
Background: The increasing availability of fungal genome sequences provides large numbers of proteins for evolutionary and phylogenetic analyses. However the heterogeneity of data...
BIBE
2006
IEEE
14 years 1 months ago
2006
IEEE
DNA sequence alignment is a critical step in identifying homology between organisms. The most widely used alignment program, ClustalW, is known to suffer from the local minima pro...
RECOMB
2005
Springer
14 years 8 months ago
2005
Springer
We describe a novel method for efficient reconstruction of phylogenetic trees, based on sequences of whole genomes or proteomes, whose lengths may greatly vary. The core of our me...
RECOMB
2006
Springer
14 years 8 months ago
2006
Springer
We study the problem of enumerating substrings that are common amongst genomes that share evolutionary descent. For example, one might want to enumerate all identical (therefore co...