73 search results - page 4 / 15 » A parallel algorithm for calculating the potential energy in... |
CPHYSICS
2008
13 years 7 months ago
2008
We examine parallel algorithms for molecular dynamics simulations involving long-range induction interactions. The algorithms are tested by performing molecular dynamics simulatio...
IPPS
2007
IEEE
14 years 1 months ago
2007
IEEE
DNA sequence alignment is a very important problem in bioinformatics. The algorithm proposed by Smith-Waterman (SW) is an exact method that obtains optimal local alignments in qua...
ERSA
2007
13 years 8 months ago
2007
Molecular Dynamics simulations have become an interesting target for acceleration using Field-Programmable Gate Arrays (FPGA). Still to be attempted completely in FPGA hardware is...
BMCBI
2010
13 years 7 months ago
2010
Background: ChIP-Seq, which combines chromatin immunoprecipitation (ChIP) with high-throughput massively parallel sequencing, is increasingly being used for identification of prot...
ICRA
2006
IEEE
14 years 1 months ago
2006
IEEE
— This paper provides that an elastic force and an elastic potential energy due to the deformation of soft fingers, which are previously derived, can be calculated into straight...