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ICCS
2009
Springer
14 years 2 months ago
GPU Accelerated RNA Folding Algorithm
Many bioinformatics studies require the analysis of RNA or DNA structures. More specifically, extensive work is done to elaborate efficient algorithms able to predict the 2-D fold...
Guillaume Rizk, Dominique Lavenier
CANDC
2006
ACM
13 years 7 months ago
An RNA folding algorithm including pseudoknots based on dynamic weighted matching
On the basis of maximum weighted matching (MWM) algorithm, we introduced a dynamic weight related with stem length and used a recursive algorithm to predict RNA secondary structur...
Haijun Liu, Dong Xu, Jianlin Shao, Yifei Wang
CCECE
2006
IEEE
14 years 1 months ago
Survey of Biological High Performance Computing: Algorithms, Implementations and Outlook Research
During recent years there has been an explosive growth of biological data coming from genome projects, proteomics, protein structure determination, and the rapid expansion in digi...
Nasreddine Hireche, J. M. Pierre Langlois, Gabriel...
BMCBI
2005
132views more  BMCBI 2005»
13 years 7 months ago
CLPM: A Cross-Linked Peptide Mapping Algorithm for Mass Spectrometric Analysis
Background: Protein-protein, protein-DNA and protein-RNA interactions are of central importance in biological systems. Quadrapole Time-of-flight (Q-TOF) mass spectrometry is a sen...
Yong Tang, Yingfeng Chen, Cheryl F. Lichti, Roger ...
ISMIR
2005
Springer
154views Music» more  ISMIR 2005»
14 years 27 days ago
Combining D2K and JGAP for Efficient Feature Weighting for Classification Tasks in Music Information Retrieval
Music classification continues to be an important component of music information retrieval research. An underutilized tool for improving the performance of classifiers is feature ...
Rebecca Fiebrink, Cory McKay, Ichiro Fujinaga