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» Additive Pattern Database Heuristics
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BMCBI
2007
152views more  BMCBI 2007»
13 years 7 months ago
Bioinformatic identification of novel putative photoreceptor specific cis-elements
Background: Cell specific gene expression is largely regulated by different combinations of transcription factors that bind cis-elements in the upstream promoter sequence. However...
Charles G. Danko, Vera A. McIlvain, Maochun Qin, B...
APBC
2004
108views Bioinformatics» more  APBC 2004»
13 years 9 months ago
Ladderlike Stepping and Interval Jumping Searching Algorithms for DNA Sequences
In this study we have designed a novel algorithm for searching common segments in multiple DNA sequences. To improve efficiency in pattern searching, combination of hashing encodi...
Tun-Wen Pai, Margaret Dah-Tsyr Chang, Jia-Han Chu,...
RCIS
2010
13 years 6 months ago
A Tree-based Approach for Efficiently Mining Approximate Frequent Itemsets
—The strategies for mining frequent itemsets, which is the essential part of discovering association rules, have been widely studied over the last decade. In real-world datasets,...
Jia-Ling Koh, Yi-Lang Tu
KDD
2008
ACM
165views Data Mining» more  KDD 2008»
14 years 8 months ago
Colibri: fast mining of large static and dynamic graphs
Low-rank approximations of the adjacency matrix of a graph are essential in finding patterns (such as communities) and detecting anomalies. Additionally, it is desirable to track ...
Hanghang Tong, Spiros Papadimitriou, Jimeng Sun, P...
CIKM
2009
Springer
14 years 2 months ago
Post-rank reordering: resolving preference misalignments between search engines and end users
No search engine is perfect. A typical type of imperfection is the preference misalignment between search engines and end users, e.g., from time to time, web users skip higherrank...
Chao Liu, Mei Li, Yi-Min Wang