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BMCBI
2004
126views more  BMCBI 2004»
13 years 6 months ago
Visualization and analysis of microarray and gene ontology data with treemaps
Background: The increasing complexity of genomic data presents several challenges for biologists. Limited computer monitor views of data complexity and the dynamic nature of data ...
Eric H. Baehrecke, Niem Dang, Ketan Babaria, Ben S...
BMCBI
2008
179views more  BMCBI 2008»
13 years 6 months ago
Building pathway clusters from Random Forests classification using class votes
Background: Recent years have seen the development of various pathway-based methods for the analysis of microarray gene expression data. These approaches have the potential to bri...
Herbert Pang, Hongyu Zhao
BMCBI
2007
129views more  BMCBI 2007»
13 years 6 months ago
HoughFeature, a novel method for assessing drug effects in three-color cDNA microarray experiments
Background: Three-color microarray experiments can be performed to assess drug effects on the genomic scale. The methodology may be useful in shortening the cycle, reducing the co...
Hongya Zhao, Hong Yan
BMCBI
2007
173views more  BMCBI 2007»
13 years 6 months ago
Recursive Cluster Elimination (RCE) for classification and feature selection from gene expression data
Background: Classification studies using gene expression datasets are usually based on small numbers of samples and tens of thousands of genes. The selection of those genes that a...
Malik Yousef, Segun Jung, Louise C. Showe, Michael...
ICDM
2003
IEEE
154views Data Mining» more  ICDM 2003»
14 years 10 hour ago
MaPle: A Fast Algorithm for Maximal Pattern-based Clustering
Pattern-based clustering is important in many applications, such as DNA micro-array data analysis, automatic recommendation systems and target marketing systems. However, pattern-...
Jian Pei, Xiaoling Zhang, Moonjung Cho, Haixun Wan...