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BMCBI
2005
113views more  BMCBI 2005»
13 years 7 months ago
Normal uniform mixture differential gene expression detection for cDNA microarrays
Background: One of the primary tasks in analysing gene expression data is finding genes that are differentially expressed in different samples. Multiple testing issues due to the ...
Nema Dean, Adrian E. Raftery
AUSDM
2007
Springer
173views Data Mining» more  AUSDM 2007»
14 years 1 months ago
The Use of Various Data Mining and Feature Selection Methods in the Analysis of a Population Survey Dataset
This paper reports the results of feature reduction in the analysis of a population based dataset for which there were no specific target variables. All attributes were assessed a...
Ellen Pitt, Richi Nayak
BMCBI
2005
124views more  BMCBI 2005»
13 years 7 months ago
ErmineJ: Tool for functional analysis of gene expression data sets
Background: It is common for the results of a microarray study to be analyzed in the context of biologically-motivated groups of genes such as pathways or Gene Ontology categories...
Homin K. Lee, William Braynen, Kiran Keshav, Paul ...
DAS
2008
Springer
13 years 9 months ago
A Comparison of Clustering Methods for Word Image Indexing
In this paper we explore the effectiveness of three clustering methods used to perform word image indexing. The three methods are: the Self-Organazing Map (SOM), the Growing Hiera...
Simone Marinai, Emanuele Marino, Giovanni Soda
BMCBI
2007
112views more  BMCBI 2007»
13 years 7 months ago
Inferring biological functions and associated transcriptional regulators using gene set expression coherence analysis
Background: Gene clustering has been widely used to group genes with similar expression pattern in microarray data analysis. Subsequent enrichment analysis using predefined gene s...
Tae-Min Kim, Yeun-Jun Chung, Mun-Gan Rhyu, Myeong ...