BLASTn is a ubiquitous tool used for large scale DNA analysis. Detailed profiling tests reveal that the most computationally intensive sections of the BLASTn algorithm are the sc...
We study the problem of enumerating substrings that are common amongst genomes that share evolutionary descent. For example, one might want to enumerate all identical (therefore co...
Stanislav Angelov, Boulos Harb, Sampath Kannan, Sa...
A user interface, such as a dialog, assists a user in synthesising a set of values, typically parameters for a command object. Code for “command parameter synthesis” is usuall...
Abstract. This work addresses a class of total-variation based multilabeling problems over a spatially continuous image domain, where the data fidelity term can be any bounded fun...
We propose a novel way to induce a random field from an energy function on discrete labels. It amounts to locally injecting noise to the energy potentials, followed by finding t...