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    COCOON
    2006
    Springer
    119views Combinatorics» more  COCOON 2006»
    Reconstructing Evolution of Natural Languages: Complexity and Parameterized Algorithms
    14 years 7 days ago
    Reconstructing Evolution of Natural Languages: Complexity and Parameterized Algorithms
    Download  www.cdm.depaul.edu
    In a recent article, Nakhleh, Ringe and Warnow introduced perfect phylogenetic networks--a model of language evolution where languages do not evolve via clean speciation--and form...
    Iyad A. Kanj, Luay Nakhleh, Ge Xia
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    BMCBI
    2010
    135views more  BMCBI 2010»
    GIGA: a simple, efficient algorithm for gene tree inference in the genomic age
    13 years 8 months ago
    GIGA: a simple, efficient algorithm for gene tree inference in the genomic age
    Download  www.biomedcentral.com
    Background: Phylogenetic relationships between genes are not only of theoretical interest: they enable us to learn about human genes through the experimental work on their relativ...
    Paul D. Thomas
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    ALMOB
    2008
    131views more  ALMOB 2008»
    Fast algorithms for computing sequence distances by exhaustive substring composition
    13 years 8 months ago
    Fast algorithms for computing sequence distances by exhaustive substring composition
    Download  www.almob.org
    The increasing throughput of sequencing raises growing needs for methods of sequence analysis and comparison on a genomic scale, notably, in connection with phylogenetic tree reco...
    Alberto Apostolico, Olgert Denas
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    BMCBI
    2008
    126views more  BMCBI 2008»
    c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
    13 years 8 months ago
    c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
    Download  www.biomedcentral.com
    Background: Computational methods for characterizing novel transcription factor binding sites search for sequence patterns or "motifs" that appear repeatedly in genomic ...
    Katerina Kechris, Hao Li
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    BMCBI
    2006
    155views more  BMCBI 2006»
    Analysis of promoter regions of co-expressed genes identified by microarray analysis
    13 years 8 months ago
    Analysis of promoter regions of co-expressed genes identified by microarray analysis
    Download  www.biomedcentral.com
    Background: The use of global gene expression profiling to identify sets of genes with similar expression patterns is rapidly becoming a widespread approach for understanding biol...
    Srinivas Veerla, Mattias Höglund
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