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RECONFIG
2009
IEEE
182views VLSI» more  RECONFIG 2009»
14 years 1 months ago
Scalability Studies of the BLASTn Scan and Ungapped Extension Functions
BLASTn is a ubiquitous tool used for large scale DNA analysis. Detailed profiling tests reveal that the most computationally intensive sections of the BLASTn algorithm are the sc...
Siddhartha Datta, Ron Sass
BMCBI
2006
121views more  BMCBI 2006»
13 years 6 months ago
Robust computational reconstitution - a new method for the comparative analysis of gene expression in tissues and isolated cell
Background: Biological tissues consist of various cell types that differentially contribute to physiological and pathophysiological processes. Determining and analyzing cell type-...
Martin Hoffmann, Dirk Pohlers, Dirk Koczan, Hans-J...
BMCBI
2010
176views more  BMCBI 2010»
13 years 4 months ago
Haplotype association analyses in resources of mixed structure using Monte Carlo testing
Background: Genomewide association studies have resulted in a great many genomic regions that are likely to harbor disease genes. Thorough interrogation of these specific regions ...
Ryan Abo, Jathine Wong, Alun Thomas, Nicola J. Cam...
TREC
2007
13 years 7 months ago
UIC at TREC 2007 Blog Track
In TREC 2007 Blog Track, we developed a three-step algorithm for the opinion retrieval task. An information retrieval step retrieves the query-relevant documents. A following opin...
Wei Zhang, Clement T. Yu
ITC
2003
IEEE
139views Hardware» more  ITC 2003»
14 years 2 hour ago
A Hybrid Coding Strategy For Optimized Test Data Compression
Store-and-generate techniques encode a given test set and regenerate the original test set during the test with the help of a decoder. Previous research has shown that runlength c...
Armin Würtenberger, Christofer S. Tautermann,...