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ISAAC
2003
Springer
70views Algorithms» more  ISAAC 2003»
14 years 26 days ago
Settling the Intractability of Multiple Alignment
In this paper some of the most fundamental problems in computational biology are proved intractable. The following problems are shown NP-hard for all binary or larger alphabets und...
Isaac Elias
DEXA
2007
Springer
150views Database» more  DEXA 2007»
14 years 1 months ago
Sequence Alignment as a Database Technology Challenge
Abstract. Sequence alignment is an important task for molecular biologists. Because alignment basically deals with approximate string matching on large biological sequence collecti...
Hans Philippi
RECOMB
2006
Springer
14 years 8 months ago
CONTRAlign: Discriminative Training for Protein Sequence Alignment
In this paper, we present CONTRAlign, an extensible and fully automatic framework for parameter learning and protein pairwise sequence alignment using pair conditional random field...
Chuong B. Do, Samuel S. Gross, Serafim Batzoglou
SWWS
2008
13 years 9 months ago
A User Guided Iterative Alignment Approach for Ontology Mapping
- The future of the Semantic Web envisions an interconnected network of data and systems where software agents can communicate seamlessly to perform complicated tasks with limited ...
Danny Chen, John Lastusky, James Starz, Stephen Ho...
SEMWEB
2007
Springer
14 years 1 months ago
A Method for Recommending Ontology Alignment Strategies
In different areas ontologies have been developed and many of these ontologies contain overlapping information. Often we would therefore want to be able to use multiple ontologies...
He Tan, Patrick Lambrix