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» Aligning Alignments
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ISMB
1996
13 years 11 months ago
Parameterization Studies for the SAM and HMMER Methods of Hidden Markov Model Generation
Multiple sequence alignment of distantly related viral proteins remains a challenge to all currently available alignment methods. The hidden Markovmodel approach offers a new,flex...
Marcella A. McClure, Chris Smith, Pete Elton
ISPD
2000
ACM
169views Hardware» more  ISPD 2000»
14 years 2 months ago
Aggressor alignment for worst-case coupling noise
In this paper we study signal alignment resulting in maximum peak interconnect crosstalk noise. We consider two cases. In the first one we assume that arbitrary arrival times of i...
Lauren Hui Chen, Malgorzata Marek-Sadowska
SEMWEB
2009
Springer
14 years 4 months ago
CompositeMatch: Detecting N-ary Matches in Ontology Alignment
Abstract. The field of ontology alignment still contains numerous unresolved problems, one of which is the accurate identification of composite matches. In this work, we present ...
Kelly Moran, Kajal T. Claypool, Benjamin J. Hescot...
FGR
1998
IEEE
142views Biometrics» more  FGR 1998»
14 years 2 months ago
View Alignment with Dynamically Updated Affine Tracking
We propose a framework for fast view alignment using adaptive affine tracking. We address the issue of modelling both shape and texture information in eigenspace for view alignmen...
Fernando De la Torre, Shaogang Gong, Stephen J. Mc...
BIOINFORMATICS
2011
13 years 5 months ago
Integrative network alignment reveals large regions of global network similarity in yeast and human
Motivation: High-throughput methods for detecting molecular interactions have produced large sets of biological network data with much more yet to come. Analogous to sequence alig...
Oleksii Kuchaiev, Natasa Przulj