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DATESO
2007
157views Database» more  DATESO 2007»
14 years 2 days ago
Index-Based Approach to Similarity Search in Protein and Nucleotide Databases
When searching databases of nucleotide or protein sequences, finding a local alignment of two sequences is one of the main tasks. Since the sizes of available databases grow const...
David Hoksza, Tomás Skopal
MICCAI
2004
Springer
14 years 11 months ago
: Multi-subject Registration for Unbiased Statistical Atlas Construction
This paper introduces a new similarity measure designed to bring a population of segmented subjects into alignment in a common coordinate system. Our metric aligns each subject wit...
Mathieu De Craene, Aloys du Bois d'Aische, Beno&ic...
BMCBI
2008
109views more  BMCBI 2008»
13 years 10 months ago
ConStruct: Improved construction of RNA consensus structures
Background: Aligning homologous non-coding RNAs (ncRNAs) correctly in terms of sequence and structure is an unresolved problem, due to both mathematical complexity and imperfect s...
Andreas Wilm, Kornelia Linnenbrink, Gerhard Steger
BMCBI
2007
119views more  BMCBI 2007»
13 years 10 months ago
A dynamic programming approach for the alignment of signal peaks in multiple gas chromatography-mass spectrometry experiments
Background: Gas chromatography-mass spectrometry (GC-MS) is a robust platform for the profiling of certain classes of small molecules in biological samples. When multiple samples ...
Mark D. Robinson, David P. De Souza, Woon Wai Keen...
SEMWEB
2007
Springer
14 years 4 months ago
Using the AgreementMaker to Align Ontologies for the OAEI Campaign 2007
In this paper, we present the AgreementMaker, an ontology alignment tool that incorporates the Descendants Similarity Inheritance (DSI) method. This method uses the structure of th...
William Sunna, Isabel F. Cruz