Sequence alignment visualization is an important tool for understanding genomics data. Current approaches have difficulty scaling to the larger data sets becoming available. In th...
SyMGiza++ -- a tool that computes symmetric word alignment models with the capability to take advantage of multi-processor systems -- is presented. A series of fairly simple modifi...
We cast the word alignment problem as maximizing a submodular function under matroid constraints. Our framework is able to express complex interactions between alignment component...
This paper addresses the problem of synchronizing movie subtitles, which is necessary to improve alignment quality when building a parallel corpus out of translated subtitles. In ...
Background: The presence of gaps in an alignment of nucleotide or protein sequences is often an inconvenience for bioinformatical studies. In phylogenetic and other analyses, for ...
Rodrigo Gouveia-Oliveira, Peter Wad Sackett, Ander...