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» Alignments of RNA Structures
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NIPS
2003
13 years 10 months ago
Gene Expression Clustering with Functional Mixture Models
We propose a functional mixture model for simultaneous clustering and alignment of sets of curves measured on a discrete time grid. The model is specifically tailored to gene exp...
Darya Chudova, Christopher E. Hart, Eric Mjolsness...
EMNLP
2008
13 years 10 months ago
Improved Sentence Alignment on Parallel Web Pages Using a Stochastic Tree Alignment Model
Parallel web pages are important source of training data for statistical machine translation. In this paper, we present a new approach to sentence alignment on parallel web pages....
Lei Shi, Ming Zhou
RECOMB
2006
Springer
14 years 9 months ago
A Study of Accessible Motifs and RNA Folding Complexity
mRNA molecules are folded in the cells and therefore many of their substrings may actually be inaccessible to protein and microRNA binding. The need to apply an accessability crite...
Ydo Wexler, Chaya Ben-Zaken Zilberstein, Michal Zi...
BMCBI
2010
113views more  BMCBI 2010»
13 years 9 months ago
Efficient protein alignment algorithm for protein search
Background: Proteins show a great variety of 3D conformations, which can be used to infer their evolutionary relationship and to classify them into more general groups; therefore ...
Zaixin Lu, Zhiyu Zhao, Bin Fu
EVOW
2007
Springer
14 years 27 days ago
Dinucleotide Step Parameterization of Pre-miRNAs Using Multi-objective Evolutionary Algorithms
MicroRNAs (miRNAs) form a large functional family of small noncoding RNAs and play an important role as posttranscriptional regulators, by repressing the translation of mRNAs. Rece...
Jin-Wu Nam, In-Hee Lee, Kyu Baek Hwang, Seong-Bae ...